FMDV C sequence data

AccessionSerotypeIsolate_nameVP1_topotypeVP1_lineageVP1_sublineageCountryLocationSpeciesDate_collectedGenome_regionSeq_lenReferenceComment
M20647C783/518       VP1633Gebauer et al., 1988 
M20646C783/63       VP1633Gebauer et al., 1988 
M20649C785/511       VP1633Gebauer et al., 1988 
M20648C785/63       VP1633Gebauer et al., 1988 
M20651C788/161       VP1633Gebauer et al., 1988 
M20652C788/532       VP1633Gebauer et al., 1988 
M20650C788/63       VP1633Gebauer et al., 1988 
M20645Cclone c12       VP1633Gebauer et al., 1988 
M20644Cclone c3B       VP1633Gebauer et al., 1988 
M19762CArg/85EURO-SA  Argentina  1985VP1627Piccone et al., 1988 
M90055CArgentina/75EURO-SA  ArgentinaSanta Fe  VP1633Martínez et al., 1992 
EU553883CArgentina/83EURO-SA  Argentina   VP1633Valarcher et al., 2008 
M90371CArgentina/83EURO-SA  Argentina   VP1633Martínez et al., 1992 
CArgentina/84EURO-SA  Argentina   P12199Feigelstock et al., 1992 
M19761CArgentina/84EURO-SA  Argentina   VP1633Piccone et al., 1988 
AJ007347CArgentina/85EURO-SA  Argentina   CG8161Escarmis et al., 1998 
L29062CArgentina/85EURO-SA  Argentina   P12196Mateu et al., 1994 
AJ007572CArgentina/85EURO-SA  Argentina   CG8161Escarmis et al., 1998 
L29078CArgentine/69EURO-SA  Argentina   P12197Mateu et al., 1994 
M90377CArgentine/69EURO-SA  Argentina   VP1633Martínez et al., 1992 
AJ306213CGral. Lamadrid/Arg/93EURO-SA  ArgentinaGral. Lamadrid  VP1630König et al., 2001 
AJ306214CGral. Roca/Arg/02/93EURO-SA  ArgentinaGral. Roca  VP1630König et al., 2001 
AJ306215CGral. Roca/Arg/03/93EURO-SA  ArgentinaGral. Roca  VP1(p)429König et al., 2001 
AJ306217CGral. Villegas/Arg/93EURO-SA  ArgentinaGral. Villegas  VP1630König et al., 2001 
AJ306216CRivadavia/Arg/93EURO-SA  ArgentinaRivadavia  VP1(p)541König et al., 2001 
AJ308703CSalto/Arg/91EURO-SA  ArgentinaSalto  VP1630König et al., 2001 
AJ308704CSan Antonio de Giles/Arg/92EURO-SA  ArgentinaSan Antonio de Giles  VP1630König et al., 2001 
AJ306218CSan Cristobal/Arg/94EURO-SA  ArgentinaSan Cristobal  VP1(p)516König et al., 2001 
M90372CTDF/Argentine/66EURO-SA  ArgentinaTierra del Fuego  P12196Martínez et al., 1992 
EU553884CAUR/4/73EURO-SA  Austria   VP1627Valarcher et al., 2008 
EU553886CBEL/1/69EURO-SA  Belgium   VP1633Valarcher et al., 2008 
EU553887CBEL/1/72EURO-SA  Belgium   VP1627Valarcher et al., 2008 
EU553885CLoupoigne/Belgium/53EURO-SA  BelgiumLoupoigne  VP1627Valarcher et al., 2008 
M90369CLoupoigne/Belgium/53EURO-SA  BelgiumLoupoigne  VP1627Martínez et al., 1992 
A06735 CIndaial/Brazil/71 EURO-SA  BrazilIndaial  VP1+2A(p)702Boothroyd and Makoff, 1984 
K01202CIndaial/Brazil/71EURO-SA  Brazil  1971VP1663Cheung et al., 1983 
M90376CIndaial/Brazil/71EURO-SA  BrazilIndaial  P12196Martínez et al., 1992 
J02184CIndaial/Brazil/71 EURO-SA  BrazilIndaial  VP1+2A(p)702Makoff et al., 1982; 
D10151 CResende O/E (attenuated) EURO-SA  BrazilResende  3'UTR94Cao et al., 1991  
D10141 CResende O/E (attenuated) EURO-SA  BrazilResende  5'UTR(p)(S-frag)364Cao et al., 1991  
D10146 CResende O/E (attenuated) EURO-SA  BrazilResende  5'UTR(p)(L-frag)718Cao et al., 1991  
AF283452 CResende/Brazil/55EURO-SA  BrazilResende  3C639van Rensburg et al., 2002  
M19760CResende/Brazil/55EURO-SA  Brazil  1955VP1633Piccone et al., 1988 
D10145 CResende/Brazil/55EURO-SA  BrazilResende  5'UTR(p)(L-frag)718Cao et al., 1991  
L08259 CResende/Brazil/55EURO-SA  BrazilResende  VP1633Schiappacassi et al., 1995  
AY026896 CResende/Brazil/55EURO-SA  BrazilResende  3A459Heath, L.E., Vosloo, W. and Nel, L.H., unpub.  
D10150 CResende/Brazil/55EURO-SA  BrazilResende  3'UTR95Cao et al., 1991  
L08386 CResende/Brazil/55EURO-SA  BrazilResende  VP1633Schiappacassi et al., 1995   
AF378301CResende/Brazil/55EURO-SA  BrazilResende  L615van Rensburg et al., 2002 
M90381CResende/Brazil/55EURO-SA  BrazilResende  P12199Martínez et al., 1992 
D10140 CResende/Brazil/55EURO-SA  BrazilResende  5'UTR(p)(S-frag)364Cao et al., 1991  
EU553888CTurup/Denmark/61EURO-SA  DenmarkTurup  VP1627Valarcher et al., 2008 
M90370CTurup/Denmark/61EURO-SA  DenmarkTurup  VP1627Martínez et al., 1992 
FJ798151CETH/1/71AFRICA  Ethiopia   VP1633Ayelet et al., 2009 
FJ798152CETH/6/2005 (1983)AFRICA  Ethiopia   VP1633Ayelet et al., 2009 
FJ798153CETH/7/2005 (1983)AFRICA  Ethiopia   VP1633Ayelet et al., 2009 
EU553891CCotes du Nord/FRA/74EURO-SA  FranceCotes du Nord  VP1627Valarcher et al., 2008 
GQ294632CFRA/2/72EURO-SA  France  19723D(p)269Reid et al., 2010 
L29061CHaute Loire/France/69EURO-SA  FranceHaute Loire  P12193Mateu et al., 1994 
EU553890CHaute Loire/France/69EURO-SA  FranceHaute Loire  VP1627Valarcher et al., 2008 
M84360CHaute Loire/France/69EURO-SA  FranceHaute Loire  VP1627Martínez et al., 1992 
EU553892CPyrenees Atlantiques/FRA/80EURO-SA  FrancePyrenees Atlantiques  VP1627Valarcher et al., 2008 
M90375CVosges/France/60EURO-SA  FranceVosges  VP1627Martínez et al., 1992 
EU553889CVosges/France/60EURO-SA  FranceVosges  VP1627Valarcher et al., 2008 
M90368CGermany/c.26 (CGC)   Germany   P12193Martínez et al., 1992 
EU553893CGermany/c.26 (CGC)   Germany   VP1627Valarcher et al., 2008 
J02191COberbayen/FRG/60EURO-SA  GermanyBavaria  3B(x3)326Forss and Schaller, 1982 
V01134COberbayen/FRG/60EURO-SA  GermanyBavaria  VP1+2A(p)685Beck et al., 1983a 
X00130COberbayen/FRG/60EURO-SA  GermanyBavaria  5'NCR(p)to2A3119Beck et al., 1983b 
EU553894COberbayern/GER/72 (GER/1/73)EURO-SA  GermanyBavaria  VP1627Valarcher et al., 2008 
EU553895CGRE/1/70EURO-SA  Greece   VP1633Valarcher et al., 2008 
EU553896CHUN/1/72 (vaccine strain)EURO-SA  Hungary   VP1627Valarcher et al., 2008 
EU553897CHUN/2/72 (field strain)EURO-SA  Hungary   VP1627Valarcher et al., 2008 
AF207522 CBombay/India/64 EURO-SA  IndiaBombay  L603George et al., unpub. (7)  
M86532 CBrescia/Italy/64EURO-SA  ItalyBrescia  VP1627Martínez et al., 1992  
M90382CBrescia/Italy/89EURO-SA  ItalyBrescia  VP1(p)266Martínez et al., 1992 
EU553902CITL/1/88EURO-SA  Italy   VP1627Valarcher et al., 2008 
EU553899CITL/2/81EURO-SA  Italy   VP1627Valarcher et al., 2008 
EU553901CITL/3/86EURO-SA  Italy   VP1627Valarcher et al., 2008 
EU553900CITL/98/85EURO-SA  Italy   VP1627Valarcher et al., 2008 
M90374CMonte Pulciano/Italy/88EURO-SA  ItalyMonte Pulciano  VP1(p)280Martínez et al., 1992 
EU553898CPerugia/ITL/63EURO-SA  ItalyPerugia  VP1627Valarcher et al., 2008 
GQ294633CJOR/11/69   Jordan  19693D(p)269Reid et al., 2010 
GU451115CK11/96AFRICA  Kenya bovine1996VP1627Sangula et al., 2010 
GU451116CK14/96AFRICA  Kenya bovine1996VP1627Sangula et al., 2010 
GU451111CK15/97AFRICA  Kenya bovine1997VP1627Sangula et al., 2010 
GU451109CK267/67AFRICA  Kenya bovine1967VP1627Sangula et al., 2010 
GU451112CK41/97AFRICA  Kenya bovine1997VP1627Sangula et al., 2010 
GU451114CK41/98AFRICA  Kenya bovine1998VP1627Sangula et al., 2010 
GU451113CK6/04AFRICA  Kenya bovine2004VP1627Sangula et al., 2010 
GU451110CK60/92AFRICA  Kenya bovine1992VP1627Sangula et al., 2010 
M90378CPHI/1/88EURO-SA  Philippines   VP1630Martínez et al., 1992 
M90373CPHI/3/87EURO-SA  Philippines   VP1627Martínez et al., 1992 
EU553903CPOR/2/80EURO-SA  Portugal   VP1627Valarcher et al., 2008 
EU553904CROM/1/72EURO-SA  Romania   VP1627Valarcher et al., 2008 
CBordills/Spain/81 (C-S17)EURO-SA  SpainBordills  3D1410Villaverde et al., 1988 
M22507CBordills/Spain/81 (C-S17)EURO-SA  SpainBordills  VP1(p)434Sobrino et al., 1986 
CBordills/Spain/81 (C-S17)EURO-SA  SpainBordills  P12145Sobrino et al., 1989 
CC-S10EURO-SA  Spain   3D1410Villaverde et al., 1988 
M22502CC-S10EURO-SA  Spain   VP1(p)201Sobrino et al., 1986 
M18899 CC-S18 EURO-SA  Spain   VP1627Martínez et al., 1988  
CC-S20EURO-SA  Spain   3D1410Villaverde et al., 1988 
M22504CC-S21EURO-SA  Spain   VP1(p)321Sobrino et al., 1986 
CC-S22EURO-SA  Spain   3D1410Villaverde et al., 1988 
AH003871CC-S8   Spain  1970L(p)45Belsham, 1992 
FJ824812CC-S8p200EURO-SA  SpainSanta Pau 1970CG8115Ojosnegros et al., 2010 
M18898 CC-S9 EURO-SA  Spain   VP1627Martínez et al., 1988  
CEsponellá/Spain/81 (C-S16)EURO-SA  SpainEsponellá  P12145Sobrino et al., 1989 
CEsponellá/Spain/81 (C-S16)EURO-SA  SpainEsponellá  3D1410Villaverde et al., 1988 
M22506CEsponellá/Spain/81 (C-S16)EURO-SA  SpainEsponellá  VP1(p)344Sobrino et al., 1986 
CRiart/Spain/82 (C-S35)EURO-SA  SpainRiart  3D1410Villaverde et al., 1988 
CRiart/Spain/82 (C-S35)EURO-SA  SpainRiart  P12145Sobrino et al., 1989 
M18900CRiart/Spain/82 (C-S35)EURO-SA  SpainRiart  VP1627Martínez et al., 1988 
K00554CSanta Pau/Spain/70EURO-SAC1 Spain  1970VP1998Villanueva et al., 1983 
M29409CSanta Pau/Spain/70 (clone vR100)EURO-SAC1 Spain  1970VP1627de la Torre et al., 1988 
M29406CSanta Pau/Spain/70 (clone vR19)EURO-SAC1 Spain  1970VP1627de la Torre et al., 1988 
M29407CSanta Pau/Spain/70 (clone vR58)EURO-SAC1 Spain  1970VP1627de la Torre et al., 1988 
M29408CSanta Pau/Spain/70 (clone vR58-C6)EURO-SAC1 Spain  1970VP1627de la Torre et al., 1988 
S87919CSanta Pau/Spain/70 (CS8)EURO-SAC1 Spain  1970L(p)35Belsham, 1992 
S87923CSanta Pau/Spain/70 (CS8)EURO-SAC1 Spain  1970L(p)10Belsham, 1992 
M11027CSanta Pau/Spain/70 (C-S8)EURO-SA  SpainSanta Pau  3D1685Martinez-Salas et al., 1985 
CSanta Pau/Spain/70 (C-S8)EURO-SA  SpainSanta Pau  P12145Sobrino et al., 1989 
CSanta Pau/Spain/70 (C-S8)EURO-SA  SpainSanta Pau  P12193Díez et al., 1990 
X69024CSanta Pau/Spain/70 (C-S8c1)EURO-SA  SpainSanta Pau  S-fragment366Escarmis et al., 1992 See also: S51913
AJ133357CSanta Pau/Spain/70 (C-S8c1)EURO-SA  SpainSanta Pau  CG8115Toja et al., 1999 
L19601CSanta Pau/Spain/70 (C-S8c1)EURO-SA  SpainSanta Pau  L603Diez et al., unpub. 
AM409190CSanta Pau/Spain/70 (H51)EURO-SA  SpainSanta Pau  CG8115Escarmis et al., 1996 
AM409325CSanta Pau/Spain/70 (H595)EURO-SA  SpainSanta Pau  CG8115Herrera et al., 2007subjected to 95 plaque-to-plaque transfers
AF274010CSanta Pau/Spain/70 (MARLS clone)EURO-SA  SpainSanta Pau  CG8115Baranowski et al., 1998 
X69407CSanta Pau/Spain/70 (R100)EURO-SAC1 Spain  1970S-fragment366Escarmis et al., 1992 see also J02181
AM503966CSanta Pau/Spain/70 (R-B 45)EURO-SA  SpainSanta Pau  CG8115Herrera et al., 2008 
AM503965CSanta Pau/Spain/70 (R-D 45)EURO-SA  SpainSanta Pau  CG8115Herrera et al., 2008 
AJ133359CSanta Pau/Spain/70 (rp146)EURO-SA  SpainSanta Pau  CG8115Toja et al., 1999derived from persistently infected BHK-21 cells, passage 146
AJ133358CSanta Pau/Spain/70 (rp99)EURO-SA  SpainSanta Pau  CG8115Toja et al., 1999derived from persistently infected BHK-21 cells, passage 99
M60118CSanta Pau/Spain/70 (R100)EURO-SA  SpainSanta Pau  P12193Díez et al., 1990 
L19602CSanta Pau/Spain/70 (R100)EURO-SA  SpainSanta Pau  L603Diez et al., unpub. 
M22505CSerra de Daró/Spain/81 (C-S15)EURO-SA  SpainSerra de Daró  VP1627Sobrino et al., 1986 
CSerra de Daró/Spain/81 (C-S15)EURO-SA  SpainSerra de Daró  3D1410Villaverde et al., 1988 
CSerra de Daró/Spain/81 (C-S15)EURO-SA  SpainSerra de Daró  P12145Sobrino et al., 1989 
M22503CToledo/Spain/79 (C-S14)EURO-SA  SpainToledo  VP1(p)230Sobrino et al., 1986; Martínez et al., 1988 
CToledo/Spain/79 (C-S14)EURO-SA  SpainToledo  P12145Sobrino et al., 1989 
AF536536CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  3D(p)383T.B. Rasmussen et al., unpub. 
M90379CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  VP1627Martínez et al., 1992 
M10505 CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  5'UTR(p)50Harris, 1980  
L19600CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  L603Diez et al., unpub. 
AF283451 CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  3C639van Rensburg et al., 2002  
AF024510CNoville/Switzerland/65EURO-SA  SwitzerlandNoville  VP1(p)417Bastos, 1998 
EU553905CUK/149/34   United Kingdom   VP1627Valarcher et al., 2008 
EU553906CUK/997/53EURO-SA  United Kingdom   VP1630Valarcher et al., 2008 
K01352CUK/997/53EURO-SA  United Kingdom  19533'UTR(p)38Porter et al., 1978 
K01353CUK/997/53EURO-SA  United Kingdom  19533'UTR(p)33Porter et al., 1978 
M10504 CUK/997/53EURO-SA  United Kingdom   5'UTR(p)70Harris, 1980  
M90380CUK/997/53EURO-SA  United Kingdom   VP1630Martínez et al., 1992 
EU553907CUKG/70/74EURO-SA  United Kingdom   VP1627Valarcher et al., 2008 
M63637 Cunknown strain    Unknown   VP1627Villaverde et al., 1991  
M63638 Cunknown strain    Unknown   VP1627Villaverde et al., 1991  
K01790 Cunknown strain    Unknown   5'UTR(p) 70Harris, 1979  
EU553908CPando/Uruguay/44EURO-SA  UruguayPando  VP1630Valarcher et al., 2008 
M90367CPando/Uruguay/44EURO-SA  UruguayPando  P12196Martínez et al., 1992